Series Master Glossary
Part 1: On the Origin of Life | Controlled vocabulary support document | source-locked | Issue 1
Control field | Value |
|---|---|
Document ID | OOL-P1-SD02-GLOSSARY |
Version / issue | Issue 1 |
Date | 2026-09-22 |
Status | Final controlled vocabulary support document for Part 1 Issue 1, source-locked to the finalised three-paper set (GOT-V1-1-1 / GOT-V1-1-2 / GOT-V1-1-3), the fixed literal primary-paper heading locators, and final SD-01. Secondary to canonical papers. |
Supersedes | Earlier Issue 1 source-lock and numbering-aligned working states. This final Issue 1 release locks the glossary to the paper-complete Part 1 source set and final SD-01; no controlled definition or canonical ownership change is introduced. |
Function | Records controlled definitions, canonical homes, relationship notes, and guardrails for major Part 1: On the Origin of Life terms. No new concepts are introduced. |
Canonical rule | Primary papers govern technical definitions. Paper 1 defines the life discriminator; Paper 2 defines life attribution; Paper 3 defines the attribution procedure. |
Source-lock rule | Use only the finalised three current Part 1 primary papers and the current SD-01 Concept Compression Map Issue 1 as support-control reference. Primary-paper internal references must use the current literal heading locator map; cited locators omit the terminal display full stop. Do not import exported full-series TEM papers, older EDT files, earlier drafts, superseded support maps, superseded support documents, or prior generated answers as conceptual source material. |
Template rule | The old Series Master Glossary document was used for glossary-table formatting, section hierarchy, and control-document discipline only. It is not a conceptual source for this Issue 1 revision. |
1. Purpose and canonical use rules
This Series Master Glossary records controlled vocabulary for Part 1: On the Origin of Life. It prevents terminology drift as the life discriminator, attribution architecture, and diagnostic procedure move into support documents, edge-case audits, and later applications.
This document does not introduce new concepts, replace the canonical papers, or re-argue the sequence. It gives a controlled definition, canonical home, relationship note, and guardrail for each major term.
• Paper 1 owns physical grounding, TC/NTC distinction, comparator discipline, IPL, DTS, the life discriminator, and the physics-chemistry-life transition framing.
• Paper 2 owns the attribution layer: candidate frame, informational regime, maintained boundary, Attribution Locus, DTS completion, continuity, ladder, closure/death, positive exclusion, residual deferral, and topology.
• Paper 3 owns the diagnostic sequence, classification output form, closure output form, audit template, exemplar desktop studies, residual inventory, update statements, and guardrails.
• A term is permitted only when its discriminator conditions remain visible.
• Primary classes, continuity statuses, topology modifiers, closure output, and residual must not be collapsed into one another.
• Residual terms hold unresolved attribution remainder; they are not explanations or verdicts.
0.1 Source-lock register
Seq. | Latest source file | Canonical paper | Canonical ownership / use |
|---|---|---|---|
Paper 1 | GOT-V1-1-1 - On the Origin of Life - Issue 1.docx | sha16 b46a62c660223454 | On the Origin of Life | Physical grounding; pancomputation discipline; Trivial Computation; Non-Trivial Computation; Nested Multiscale Framework; evaluation conditions; readout and temporal framing; Baseline Dynamics; Information Processing Locus; Driven Thermodynamic System; life as driven thermodynamic constraint-maintenance supported by IPL-mediated NTC; physics-chemistry-life transition. |
Paper 2 | GOT-V1-1-2 - The Identification of Life - Issue 1.docx | sha16 0f1f564c3786f208 | The Identification of Life | Attribution architecture; candidate frame; reference-indexed attribution; informational regime; life-realisation; maintained boundary; Attribution Locus; DTS completion; organisational identity; intrinsic resumability; potential informational throughput; throughput identity; continuity status; death as branch-closure; closure output; post-death constituent reframing; positive exclusion; residual deferral; relationship topology; formal ladder. |
Paper 3 | GOT-V1-1-3 - The Life Attribution Procedure - Issue 1.docx | sha16 6c6d2b60203198e8 | The Life Attribution Procedure | Diagnostic sequence; reference preflight; candidate framing; life-realisation threshold; Attribution Locus localisation; DTS-completion localisation; identity and continuity determination; primary class assignment or residual deferral; topology assignment; residual inventory and update statement; standard attribution output; closure output form; audit template; exemplar desktop studies; cross-case findings; guardrails and failure modes. |
Control ID | Latest control file | Permitted use |
|---|---|---|
SD-01 | Concept Compression Map - Issue 1.docx | sha16 a256c5229849f993 | Architecture compression and support-stack alignment for the finalised source set. Secondary to the primary papers. |
Template-source use: the prior version of this support document was used for formatting, table pattern, section hierarchy, and release-control structure only. It is not a conceptual source for this Issue 1 revision.
Excluded source class: exported full-series TEM papers and concepts, older project files, earlier EDT documents, superseded support-map wording, superseded support-document wording, and prior generated answers are not conceptual sources for this Issue 1 support set.
2. Canonical ownership map
Canonical paper | Controlled region | Guardrail |
|---|---|---|
Paper 1 - On The Origin of Life | Physical grounding, pancomputation discipline, NMF, TC, NTC, BD, IPL, DTS, Living System, life discriminator, and physics-chemistry-life transition. | Life remains stricter than NTC, complexity, metabolism, reproduction, feedback, adaptation, persistence, or biological familiarity alone. |
Paper 2 - The Identification of Life | Attribution architecture, candidate frame, informational regime, life-realisation, maintained boundary, Attribution Locus, DTS completion, identity, continuity, potential throughput, death/closure, positive exclusion, residual deferral, formal ladder, and topology. | Do not treat familiar matter-state boundaries, containment, dependence, lineage, topology, or uncertainty as attribution verdicts. |
Paper 3 - The Life Attribution Procedure | Reference preflight, diagnostic sequence, classification output form, closure output form, audit template, strength markers, residual inventory, update conditions, exemplar desktop studies, and guardrails. | Do not turn procedure into the phenomenon or reduce the audit sequence to a mechanical checklist. |
3. Controlled vocabulary
A. Physical grounding, computation, and life threshold
Term | Controlled definition | Canonical home / type | Relationship and guardrail |
|---|---|---|---|
Pancomputation | View that lawful physical processes can be computationally described under some encoding. | Paper 1 | Context | Useful as background only; unrestricted redescription cannot define life. |
Trivial Computation (TC) | Lawful physical state evolution redescribable computationally under a chosen encoding. | Paper 1 | Computation | Description is not discrimination. TC cannot define life. |
Non-Trivial Computation (NTC) | Organisation-dependent, counterfactually testable downstream outcome dependence on discriminable distinctions under specified reference conditions and comparator discipline. | Paper 1 | Computation | No NTC without discriminable distinction, downstream dependence, organisation mediation, and BD pressure. |
Reference conditions | Boundary, scale, operational horizon, discrimination/noise regime, comparator assumptions, driving, and component inventory under which a claim is evaluated. | Paper 1 | Evaluation | Reference conditions make claims testable; they do not make claims true. |
Readout | Bounded registration of an outcome, trajectory class, trace, measurement, simulation result, or model comparison under finite conditions. | Paper 1 | Evaluation | Objectivity is indexed to stable readout pathways, error control, comparator discipline, and reproducibility. |
Kinematic Microstate Baseline (KMB) | Universe-level space of all kinematically admissible microstates. | Paper 1 | Grounding | Physical possibility is not yet organisation-dependent distinction. |
Boundary Condition (BC) | Constraint imposed by system/environment delimitation and permitted exchanges. | Paper 1 | Grounding | BC enables system description; it is scale-dependent. |
Thermodynamic State Space (TSS) | Coarse-grained thermodynamic macrostate description stable under boundary conditions. | Paper 1 | Grounding | TSS is regime description, not replacement of microphysical admissibility. |
Thermodynamic information | Regime in which informational distinctions are tied to physical costs of stability, manipulation, erasure, dissipation, and work coupling. | Paper 1 | Grounding | Distinctions are physically embodied, not immaterial labels. |
Emergent Boundary Condition (EBC) | Organisation-generated constraint functioning effectively as a boundary condition for lower-level components. | Paper 1 | Grounding | EBC is generated by organisation; it is not a new substance. |
Constrained Thermodynamic State Space (CTSS) | Subset of thermodynamic macrostates and trajectories accessible under emergent boundary conditions and organisational constraints. | Paper 1 | Grounding | CTSS names state-space restriction, not visual complexity. |
Constrained Thermodynamic System (CTS) | BC-defined system whose realised trajectory occupies CTSS because of EBC or organisational constraints. | Paper 1 | Grounding | CTS is the system instance; CTSS is the regime descriptor. |
Driven Thermodynamic State Space (DTSS) | Thermodynamic regime in which a system is maintained away from equilibrium by sustained energy and/or matter throughput. | Paper 1 | Grounding | DTSS requires driving, not transient constraint alone. |
Driven Thermodynamic System (DTS) | BC-defined system whose trajectory is embedded in DTSS and maintained away from equilibrium by sustained driving. | Paper 1 | Grounding / Life | DTS is horizon-relative; sustained throughput must be specified. |
Shannon Information Theory (SIT) | Regime in which information is discriminable distinctions over a channel relative to alphabet, noise model, and receiver/locus discrimination capacity. | Paper 1 | Grounding | Do not treat mere difference as information without channel-relative discriminability. |
Reference alphabet | Set of symbol classes induced by physically supported tokenisation at the reference scale. | Paper 1 | Grounding | Alphabet is supported only where classes are stable and reproducible. |
Tokenisation | Physically implementable classification rule assigning admissible states or histories to labels under boundary, constraint, driving, and noise conditions. | Paper 1 | Grounding | Technical tokenisation is not arbitrary external coding. |
Baseline Dynamics (BD) | Intervention-defined comparator family preserving relevant context while disabling the organisation, channel, tokenisation, or pathway under test. | Paper 1 | Comparator | BD is not nothing; it is disciplined contrast. |
BD-family comparator | Comparator intervention that ablates, scrambles, neutralises, resets, bypass-controls, or otherwise disables the proposed mediating organisation while preserving comparability. | Paper 1 | Comparator | Weak comparators let false NTC and life claims survive. |
Information Processing Locus (IPL) | Organisation whose integrity is required for downstream trajectory selection to depend on the relevant distinction. | Paper 1 | Localisation | IPL is not consciousness, cognition, central control, symbolic representation, or the Attribution Locus by default. |
Life | Driven thermodynamic constraint-maintenance supported by IPL-mediated NTC. | Paper 1 | Life threshold | Life is stricter than information, NTC, metabolism, reproduction, feedback, persistence, adaptation, or familiarity alone. |
Living System | System satisfying the life discriminator over the relevant operational horizon. | Paper 1 | Life | Do not infer life from complexity, activity, or lineage alone. |
Physics-chemistry-life transition | Emergent-regime transition in which chemical organisation becomes audit-incomplete without the discriminator question of distinction-conditioned maintenance. | Paper 1 | Origin framing | Life does not leave physics or chemistry; chemistry alone does not settle life-status. |
B. Attribution architecture, boundary, locus, and completion
Term | Controlled definition | Canonical home / type | Relationship and guardrail |
|---|---|---|---|
Candidate frame | Provisional reference-indexed delimitation of the system, subsystem, process, relation, remnant, or coupled organisation proposed as the site of attribution. | Paper 2 | Attribution | The frame states what is being tested; it does not establish the living locus. |
Frame correction | Adjustment of the candidate frame when the initial delimitation fails to match the maintained regime, completion relation, or continuity path. | Paper 2 | Attribution | Frame correction is part of attribution, not a procedural defect. |
Reference-indexed attribution | Attribution specifying locus, boundary, interface, scale, horizon, driving, comparator assumptions, and continuity relation strongly enough for the claim. | Paper 2 | Attribution | The disciplined question is alive as what locus, over what horizon, through what boundary. |
Positive exclusion | Output stating that a tested relation is not warranted under the stated reference conditions, rather than merely being unknown. | Paper 2 / 3 | Attribution output | Do not use uncertainty as negative confirmation; distinguish exclusion from residual. |
Informational regime | Physically supported organisation in which identity-relevant distinctions are preserved, made operative, resumed, transmitted, completed, or closed under reference conditions. | Paper 2 | Attribution | Not every describable difference is an informational regime. |
Informational regime attribution | Evaluation of the identity-bearing distinctions a candidate preserves and the regime in which those distinctions become operative, resumable, completable, or closed. | Paper 2 | Attribution | Observer-assigned meaning is not enough. |
Life-realisation | Actual occurrence of the Paper 1 life relation within a candidate frame as driven constraint-bearing organisation maintained, redirected, or completed through localisable distinction-conditioned organisation. | Paper 2 | Threshold attribution | Life-realisation in a frame does not prove the frame itself is the living locus. |
Realised informational throughput | Identity-relevant distinctions presently operative in maintenance, redirection, or completion of a life-realising regime. | Paper 2 | Throughput | Stored content alone is not realised throughput. |
Maintained boundary | Interface through which a life-realising or life-relevant informational regime preserves its organised distinction from what lies outside it. | Paper 2 | Boundary | Boundary is functional and informational, not merely a line around matter. |
Attribution Locus | Operational unit to which a life-relevant regime relation is attributed: active life-realisation, intrinsic resumability, potential throughput, target-locus closure, reconstruction, incorporation, positive exclusion, or residual. | Paper 2 | Locus | The Attribution Locus is the bearer of attribution; it is not automatically the IPL, visible object, container, genome, or lineage. |
Functional sublocus | Component whose organisation contributes to a larger life-realising regime without thereby becoming a life form at the claimed scale. | Paper 2 | Locus | Functional necessity is not life-status. |
Nested locus | Lower-order locus existing within or participating in a higher-order locus while retaining its own attribution relation. | Paper 2 | Locus / topology | Nested attribution does not imply contradiction. |
Distributed locus | Locus whose maintained regime depends on spatially extended coupling, scaffolding, or recurrent exchange. | Paper 2 | Locus | Distribution raises the burden to specify boundary, completion, and continuity. |
DTS completion | Localisation of where the driven thermodynamic system is actually performed, intrinsically resumable, or extrinsically completable as a life-relevant regime. | Paper 2 | Completion | The question is where life-realising informational throughput becomes actual. |
Resource dependence | Dependence on environmental matter, energy, substrate, or permissive conditions while the candidate organisation performs constitutive maintenance operations. | Paper 2 | Completion | Resource dependence does not weaken life-status by itself. |
Scaffolded support | External support supplying stabilising conditions while the candidate remains the locus whose identity-bearing organisation is maintained. | Paper 2 | Completion | Artificial support alone does not decide life-status. |
Constitutive dependence | Dependence in which another organised locus performs operations required to complete the candidate maintenance or throughput relation. | Paper 2 | Completion | Constitutive dependence changes attribution; it is not an automatic verdict. |
Host completion | Extrinsic completion relation in which a host regime makes a candidate throughput operative. | Paper 2 | Completion / potential | Host completion is not free-phase Life. |
Coupled completion | Case where no component alone completes the relevant regime but the organised relation between components does. | Paper 2 | Completion | Coupling does not automatically establish unity. |
Higher-order locus | Coupled organisation that stabilises a maintained regime beyond its participating loci. | Paper 2 | Topology | Requires more than interaction or dependence. |
C. Identity, continuity, primary ladder, and death/closure
Term | Controlled definition | Canonical home / type | Relationship and guardrail |
|---|---|---|---|
Organisational identity | Continuity of the maintained organisation by which the same locus remains attributable through change, development, dormancy, repair, transformation, or terminal completion. | Paper 2 | Continuity | Identity is not mere material sameness or name persistence. |
Intrinsic resumability | Same-locus capacity by which active life-realisation can resume from a continuity-preserving suspended or dormant condition under permissive conditions. | Paper 2 | Continuity | Intrinsic resumption is not extrinsic reconstruction. |
Continuity-preserving suspension | Mode in which active throughput is reduced or suspended while identity-bearing organisation and intrinsic resumability remain preserved. | Paper 2 | Continuity | Suspension does not by itself imply Life-in-Potential or death. |
Dormant Life | Continuity mode inside Life where active throughput is reduced or suspended but intrinsic same-locus resumability remains preserved. | Paper 2 | Continuity / class mode | Dormancy is not Life-in-Potential and not death. |
Terminal active Life | Continuity mode inside Life where distinction-conditioned organisation is still completing a terminal regime even though future branch-space is narrowing. | Paper 2 | Continuity / class mode | Terminality modifies horizon; it does not remove Life before branch closure. |
Potential informational throughput | Identity-bearing potential throughput preserved by a non-life-realised organisation into an admissible extrinsic life-realising completion pathway. | Paper 2 | Potential | Not weak life, mere biological material, stored sequence, trigger, or reconstructability. |
Throughput identity | Continuity of identity-relevant distinctions from a non-life-realised candidate into later extrinsic completion where those distinctions become operative. | Paper 2 | Potential | Without throughput identity, Life-in-Potential is not warranted. |
Lineage identity | Continuity relation of descent, copying, or historical derivation after organisational or throughput identity has been established. | Paper 2 | Continuity | Lineage does not settle present life-status. |
Continuity status | Status of a target locus or throughput relation as active, dormant, terminal active, potential, or closed; uncertain statuses are carried in residual. | Paper 2 / 3 | Classification | Continuity status must be assigned before primary class closure. |
Branch-closure | Closure of all future counterfactual branch-realisation for a target locus as that locus. | Paper 2 | Death / closure | Branch closure applies to the target identity, not every constituent. |
Death / closed continuity | Closure status of a formerly living target locus whose future counterfactual branch-realisation as that locus has closed. | Paper 2 | Continuity status | Death is not a fourth primary class. |
Closure output | Separate output route for death of a formerly living target locus: closed continuity / formerly living target locus / no further same-locus DTS completion / remnant or fragmentation topology / residual. | Paper 3 | Output form | Closure output prevents death from entering the primary-class field. |
Post-death constituent reframing | Requirement to reframe remaining constituents after target-locus death rather than spreading the same status to all matter inside the former system. | Paper 2 | Death / attribution | A dead organism may contain living subloci, Life-in-Potential candidates, or Complex Chemistry. |
Reconstruction | Cross-locus descriptor for later life-like or life-realising production after identity-bearing continuity has failed. | Paper 2 | Continuity descriptor | Reconstruction is not same-locus resumption. |
Incorporation | Cross-locus descriptor for material entering another living regime without preserving the prior identity. | Paper 2 | Continuity descriptor | Incorporation is not survival. |
Complex Chemistry | Primary class where the candidate may be complex, organised, reactive, or biologically related but lacks active life-realisation, intrinsic resumability, and identity-bearing potential throughput. | Paper 2 | Primary class | Biological derivation alone does not exceed Complex Chemistry. |
Life-in-Potential | Primary class for non-life-realised candidates preserving identity-bearing potential informational throughput into admissible extrinsic life-realising completion. | Paper 2 | Primary class | Life-in-Potential is narrow; it is not ordinary potential life. |
Life as primary class | Primary class where the candidate is the Attribution Locus of active or intrinsically resumable regime maintenance. | Paper 2 | Primary class | Class assignment requires correct locus and continuity attribution. |
Formal ladder | Three-class ladder: Complex Chemistry, Life-in-Potential, Life. | Paper 2 | Classification | Death, reconstruction, incorporation, topology, and uncertainty are not primary classes. |
D. Procedure, output form, residual, and audit terms
Term | Controlled definition | Canonical home / type | Relationship and guardrail |
|---|---|---|---|
Life Attribution Procedure | Diagnostic expression of the attribution canon, moving from frame to relation, locus, completion, continuity, class, topology, residual, and update. | Paper 3 | Procedure | Procedure applies the canon; it does not add a new life theory. |
Reference preflight | Stage 0 of the procedure: states candidate, scale, boundary, horizon, interface, driving, discrimination/noise regime, comparator assumptions, and continuity question. | Paper 3 | Procedure stage | Without preflight, classification drifts between scales and horizons. |
Candidate framing | Stage 1 of the procedure: states what is being tested and permits later frame correction. | Paper 3 | Procedure stage | The frame is not the answer. |
Life-realisation threshold | Stage 2 of the procedure: tests driven constraint-bearing regime, operative distinction, and maintenance relevance. | Paper 3 | Procedure stage | Failure of present life-realisation does not end the audit. |
Attribution Locus localisation | Stage 3 of the procedure: identifies the bearer of the regime relation under evaluation. | Paper 3 | Procedure stage | Life inside a frame is not Life of the frame. |
DTS-completion localisation | Stage 4 of the procedure: identifies where the life-realising, resumable, or potential completion relation is performed. | Paper 3 | Procedure stage | Dependence is too coarse; completion must be localised. |
Identity and continuity determination | Stage 5 of the procedure: determines whether identity-bearing throughput is active, dormant, terminal active, potential, closed, or uncertain with residual. | Paper 3 | Procedure stage | Dormancy, potential, closure, reconstruction, and incorporation must not be collapsed. |
Primary class assignment | Stage 6 output where Complex Chemistry, Life-in-Potential, or Life is assigned after preceding burdens are met. | Paper 3 | Procedure stage | Death, topology, and uncertainty must not enter the primary ladder. |
Primary-class deferral | Audit result where primary-class assignment would overstate support and the class field is withheld with residual and update condition. | Paper 3 | Output form | Deferral is not a fourth ladder value. |
Topology and relationship assignment | Stage 7 output describing relations among already-attributed loci. | Paper 3 | Procedure stage | Topology follows attribution; it is not a verdict. |
Standard attribution output | Output form: primary class or residual deferral / continuity status / attributed locus / DTS-completion relation / topology or relationship modifier / residual. | Paper 3 | Output form | Separate fields prevent a naked noun from replacing the attribution relation. |
Residual | Disciplined remainder identifying the local missing discriminator condition and update condition. | Paper 3 | Residual | Residual is not a class, continuity status, topology modifier, explanation, or hidden verdict. |
Residual inventory | List of residual types by missing discriminator condition: frame, reference condition, threshold, operative distinction, comparator, Attribution Locus, DTS completion, continuity, throughput identity, closure, topology, or constituent audit. | Paper 3 | Residual | Inventory prevents uncertainty from becoming a hidden class. |
Update condition | Observation, intervention, comparator result, continuity demonstration, or completion-path demonstration that would change the attribution. | Paper 3 | Residual | Every residual requires an update condition. |
Strength marker | Optional marker such as strong, provisional, weak, or primary-class deferral summarising support without replacing residual. | Paper 3 | Output form | Strength markers must not create false precision. |
Exemplar desktop study | Stylised application of the procedure to an edge-case candidate frame rather than a final empirical verdict for all instances of a named category. | Paper 3 | Edge-case discipline | Examples are conditional on reference frame, scale, horizon, and comparator assumptions. |
4. Misuse compression
Misuse | Why it fails | Controlled correction |
|---|---|---|
Life = complexity / metabolism / reproduction / adaptation | These may be cues or mechanisms but do not state the discriminator. | Require driven constraint-maintenance supported by IPL-mediated NTC. |
Life inside frame = Life of frame | A frame may contain a life-realising locus without being the locus. | Localise the Attribution Locus before primary class. |
Dormant = Life-in-Potential | Dormancy preserves intrinsic same-locus resumability. | Use Life with dormant continuity where intrinsic resumability remains open. |
Death = fourth class | Death closes a formerly living target locus; it does not classify all remnants. | Use closure output and reframe constituents. |
Potential = any stored sequence or biological material | Life-in-Potential requires throughput identity into admissible extrinsic completion. | Require identity-bearing potential informational throughput. |
Uncertain = unresolved verdict | Uncertainty is not a canonical field value except as a field condition carried in residual. | State the missing discriminator condition and update condition. |
Positive exclusion = uncertainty | A relation can be excluded under stated conditions without every broader question being solved. | Separate positive exclusion from residual deferral. |
5. Change log
Issue | Date | Change | Authority |
|---|---|---|---|
Issue 1 | 2026-09-22 | Final Issue 1 source-lock release aligned to the fixed literal heading locators, the recorded final filenames and hashes for GOT-V1-1-1, GOT-V1-1-2, and GOT-V1-1-3, and final SD-01. Controlled definitions, terminology, and canonical ownership remain unchanged. | Finalised source-locked Part 1 primary/support set, Issue 1. |
6. Release/revision checklist
• Does each term remain tied to a canonical home?
• Does every compressed definition preserve the discriminator conditions?
• Does the glossary distinguish IPL from Attribution Locus?
• Does Life-in-Potential remain narrower than ordinary potential life?
• Are death/closure, reconstruction, incorporation, topology, and uncertainty excluded from the primary ladder?
• Are positive exclusion and residual deferral separated?
• Does every residual term require a local missing condition and update condition?
• Does the glossary avoid importing exported full-series TEM terms?